BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025A06LP1|AL428311
(898 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1574 1760 0.0
>3x_Contig1574
Length = 8021
Score = 1760 bits (888), Expect = 0.0
Identities = 897/899 (99%), Gaps = 1/899 (0%)
Strand = Plus / Minus
Query: 1 cctcctaaccaaccgcagcttcaacagcctcaacctcagaaacctcgtataccacttcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1982 cctcctaaccaaccgcagcttcaacagcctcaacctcagaaacctcgtataccacttcag 1923
Query: 61 caacaaatggggaatccacaacaaatgattggaggtcaacctataactcagaatatacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1922 caacaaatggggaatccacaacaaatgattggaggtcaacctataactcagaatatacca 1863
Query: 121 gttatgaacagtaatcaatcgatggttccttcgtcacaacagccacaatcacaaccacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1862 gttatgaacagtaatcaatcgatggttccttcgtcacaacagccacaatcacaaccacca 1803
Query: 181 caaccaccacaacgacaaccaccacaacgacaacaacaacaacaagtcccagtttcagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1802 caaccaccacaacgacaaccaccacaacgacaacaacaacaacaagtcccagtttcagta 1743
Query: 241 ccacagccacctcaaccatcacaagctgcaatactacagcaagtgcttcagaagtttcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1742 ccacagccacctcaaccatcacaagctgcaatactacagcaagtgcttcagaagtttcag 1683
Query: 301 aaacaacttcctgatattcccaaattccaaactattcttcaagacccacctgagactcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1682 aaacaacttcctgatattcccaaattccaaactattcttcaagacccacctgagactcca 1623
Query: 361 ttacctcatactaggttatggtcagagaaagaaagagctgataacgagcctgtgagtttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1622 ttacctcatactaggttatggtcagagaaagaaagagctgataacgagcctgtgagtttt 1563
Query: 421 gatacaagattatatgaacatgttattgaacgggatttgttggataaggacaacttgttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1562 gatacaagattatatgaacatgttattgaacgggatttgttggataaggacaacttgttg 1503
Query: 481 gcggacactaatggattggaacctatttccaaattcggattcagtcagagggaggtaata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1502 gcggacactaatggattggaacctatttccaaattcggattcagtcagagggaggtaata 1443
Query: 541 ttgagattacagcaagatcttgattattacaaagaattgaggaacagtcgaatgcnatcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1442 ttgagattacagcaagatcttgattattacaaagaattgaggaacagtcgaatgcaatcc 1383
Query: 601 attaccaacacaactcaaggacataaatctaagagtatatggggtgacggttattctgga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1382 attaccaacacaactcaaggacataaatctaagagtatatggggtgacggttattctgga 1323
Query: 661 tatggaaatggcttcagtaacgatctcacaaggattcaagtcgatgacacttatgaaatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1322 tatggaaatggcttcagtaacgatctcacaaggattcaagtcgatgacacttatgaaatg 1263
Query: 721 cacttggacgaaatatatgaatggacaatgaatcaaacaggggaggaactagtacctgtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1262 cacttggacgaaatatatgaatggacaatgaatcaaacaggggaggaactagtacctgtt 1203
Query: 781 agattagagtttgatgcagaaaaggataaatttactttgagggacacattcgtatggaac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 agattagagtttgatgcagaaaaggataaatttactttgagggacacattcgtatggaac 1143
Query: 841 agatcagacacgctactgtcaatcaacgaatttgtg-aaacaacgctgaaggattatag 898
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1142 agatcagacacgctactgtcaatcaacgaatttgtgaaaacaacgctgaaggattatag 1084
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7067
Number of Sequences: 1807
Number of extensions: 7067
Number of successful extensions: 380
Number of sequences better than 1.0e-20: 1
length of query: 898
length of database: 10,358,551
effective HSP length: 16
effective length of query: 882
effective length of database: 10,329,639
effective search space: 9110741598
effective search space used: 9110741598
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)